Browse of TCMCG034C44886 protein

CDS

Accession Number	TCMCG034C44886
gbkey	CDS
Protein Id	XP_028959183.1
Location	join(28553201..28553240,28553633..28553778,28554111..28554206,28554281..28554333,28554504..28554635,28555133..28555184,28555475..28555594,28555827..28555961,28556490..28556618,28556887..28556964,28557170..28557307,28557940..28558034,28558259..28558452,28558596..28559383,28559751..28559831,28559950..28560015,28560140..28560217,28560483..28560713,28560899..28561021,28561182..28561358,28561602..28561787,28562270..28562643,28562934..28563048)
Gene	LOC103406499
GeneID	103406499
Organism	Malus domestica

Protein

Length	1208aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA534520
db_source	XM_029103350.1
Definition	cleavage and polyadenylation specificity factor subunit 1 isoform X2 [Malus domestica]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACATGAAGCATGTAAAGGATTTTACATTTGTACATGGTTACATTGAGCCTGTGATGGTTATCCTTCACGAGCAGGAGCTTACTTGGGCTGGGCGTGTCTCATGGAAGCACCATACTTGTATGATTTCTGCACTTAGTATCAGCACAACTTTGAAGCAGCATCCGCTCATATGGTCAGCTGTTAATCTCCCCCATGATTCCTGCAAGCTGCTTGCTGTACCATCTCCAATTGGTGGTGTTCTGGTGATTAGTGCAAATTCTATCCATTATCATAGCCAGTCAGCCTCATGCGCATTGGCATTAAACAGTTATGCTGTTTCTGTTGATAGCAGTCAAGAGATGCCAAGATCTAGTTTTACTGTGGAGCTTGATGCTGCCAATGCAACTTGGTTGCTGAACGATGTAGCCTTGTTGTCTACAAAAACTGGGGAGCTACTATTGCTTACCCTTGTTTATGATGGACGGGTTGTACAGAGACTTGACCTTTCAAAGTCTAAAGCTTCAGTACTTACGTCGGGGATTACAACACTTGGAAATTCATTATTTTTTCTGGGCAGTCGGTTAGGGGACAGTTTGCTTGTGCAGTTCACTTGTGGAGGAGGGGGCTCAATGTTGTCATCTGGTTTGAAGGATGAGGTAGGGGATATTGAGGGTGATATCCCATCGGCCAAGCGACTGCGATTGTCGTCTTCGGATGCATTGCAAGATATGGTTAGCGGTGAGGAGCTCTCTCTGTTTGGGTCAGCTCCAAATAGTGCAGATTCAGCTCAGAAGTCTTTTTCATTTGCTGTAAGGGACTCTTTGATTAATGTTGGTCCTTTGAAGGACTTCTCCTATGGTTTAAGGATTAATGCAGATGCAAATGCTACTGGAATTGCTAAACAGAGTAATTACGAACTGGTCTGCTGTTCCGGTCATGGAAAGAATGGTGCCCTCTCTGTTCTTCGTCAGTCAATAAATCCAGAAATGATTACTGAGGTTGAACTACCAGGTTGTAAGGGAATTTGGACTGTTTACCACAAGAATGCACGTGGTCATAATGCTGATTCTAAAATCGCTGCTTCTGATGATGAATATCATGCATATTTAATTATAAGTCTGGAGGCTCGAACGATGGTACTTGAAACAGCAGATCTTCTGAGTGAAGTGACAGAAAGTGTTGACTATTTTGTGCAAGGGAGAACAATTGCTGCAGGGAATTTGTTTGGAAGGCGTCGAGTTGTGCAGGTCTATGAACGCGGTGCTCGAATTCTCGATGGTTCTTTTATGACTAAGGATATAAGCTTTGGAACTTTGAATGCTGAATCGGCCACCGGTTCAGAGAGCACAGTGTTATCAGTTTCTATTGTTGATCCGTATGTATTGCTGAGAATGTCTGATGGTGGTATTCGACTCCTCATTGGAGATCCTTCTTCGTGCACTGTTTCTGTAAGCATTCCAGCTGCCTTTGAGAACTTGAAGAAACAAATATCCGCTTGTACACTTTATCATGATAAAGGACCTGAGCCTTGGCTTCGGAAGGCAAGTACTGATGCTTGGCTTTCCACAGGAGTGGACGAAGCCATTGATGGTTCTGATGGTTTATTACATGATCAGGGTGATATATATTGTGTTGTTTGTTATGAAAGTGGTTCCCTTGAAATATTTGATGTGCCCAATTTTAATTGTGTTTTCTCCGTGGATAAATTTGTATCGGGAAAGACGCACCTAGTTGATACTTTAATGCAAGACCCTTCAAAAGATTCCCAAAAACTGATCAATAAAAGTTCTGAAGAAGTGAGTGGCCAGGGCAGAAAAGAAAATATAGAGGATATGAAAGTTGTAGAGCTGGCTATGCAGAGATGGTCGGGACAGCATAGCCGTCCTTTTCTTTTTGGGATATTGAATGACGGGATGATTCTTTGTTACCATGCTTACCTGTTTGAAGGTCCAGAGACTACCTCTAAAACTGAAGATTCCGCTTCGGCACAGAGTACTTCTGGCTTAACCAATGTTAGTGCTTCAAGGCTTAGAAACTTGAGATTTGCTCGTGTCCCCTTGGACACGTATGCTAGGAAGGACATGTCAACTGAAACTTCGTGCCAAAGAATGACAATTTTCAAGAACATTGCTGGTTATCAGGGGTTGTTCCTTTCTGGGTCAAGACCAGCTTGGTTAATGGTTTTCAGAGAACGTCTACGTGTTCATCCACAGCTTTGTGATGGTTCAGTTGTTGCCTTCACTGTCCTTCACAATGTGAATTGTAATCATGGGCTCATATATGTTACATCACAGGGTATATTGAAGATTTGCCAACTGCCACCTATCTCAAGCTATGACAATTATTGGCCAGTACAAAAGATTCCATTGAAAGGAACTCCTCATCAGGTCACTTACTTTGCAGAGAAGAATTTATACCCACTTATAGTTTCAGTACCTGTGCATAAACCACTGAATCAAATTCTTTCGTCTTTGGTTGATCAAGAAGCTGGCCATCAGGTTGAGAATCATAATTTGAGTTCTGATGAACTACACAGAACTTATACTGTTGATGAATTTGAGGTTCGGATTATGGAGCCAGAAAAATCTGGTGGACCTTGGCAAACTAAGGCCACCATTCCCATGCAAACTTCTGAAAATGCTCTAACTGTTCGAGTGGTTACGCTGTTTAATACAACCACCAACGAGAATGAAACACTTATAGCAATTGGGACTGCGTATGTGCAAGGGGAGGATGTTGCTGCTAGAGGACGGGTTCTTTTATTTTCAGCTGGAAACAATACTCAGAATTTGGTTTCAGAGGTGTATGCCAAAGAATTCAAGGGTGCCATATCTGCATTAGCGTCACTTCAAGGTCATTTGTTGATAGCACAAGGTCCTAAAATTACTTTAAACAAGTGGAATGGCACTGAACTGAATGGTGTGGCATTTTTTGATGTTCCACCATTGTACGTTGTGAGCTTGAATATTGTTAAGAATTTTATCCTCCTTGGTGACATTCACAAAAGCATTTACTTTCTCAGTTGGAAGGAGCAGGGATCTCAGCTCAATTTGTTGGCCAAGGATTTTGGTAACCTAGATTGTTTTGCAACGGAATTTCTGATTGATGGAAGTACACTGAGCCTTGTAGTTGCAGATGAACAAAAGAACATTCAGATCTTTTTCTATGCACCAAAGATGTCTGAGAGTTGGAAAGGTCAGAAGCTTCTCTCAAGGGCTGAATTTCATGTTGGAACCCATGTTACCAAGTTCTTGCGGTTGCAGATGCTCTCTACTTCAGGGACCAATCCAGGCTCTGACAAAACTAATCGCTATGCTTTGTTATTTGGTACCCTGGATGGCAGCATTGGTTGTGTTGCGCCTCTTGATGAACTGACATTTCGTAGGTTGCAGTCACTACAGAAAAAGCTCGTTGATGCAGTTGCCCATGTTGCTGGTTTGAATCCAAGAGCTTTCCGCCAGTTTCGGTCAAATGGAAAGGCTCATCGGCCTGGCCCTGACACCATAGTTGACTGCGAGCTTCTAACCCATTACGAGATGCTTCCATTGGAGGAACAGCTTGAAATTGCAAACCAGATAGGGACGACTCGTTCACAAATTTTCACAAACTTAAATGACCTTGCTATAGGAACGAGCTTCTTGTAA

Protein:   MDMKHVKDFTFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDSCKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSVDSSQEMPRSSFTVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGITTLGNSLFFLGSRLGDSLLVQFTCGGGGSMLSSGLKDEVGDIEGDIPSAKRLRLSSSDALQDMVSGEELSLFGSAPNSADSAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGALSVLRQSINPEMITEVELPGCKGIWTVYHKNARGHNADSKIAASDDEYHAYLIISLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYERGARILDGSFMTKDISFGTLNAESATGSESTVLSVSIVDPYVLLRMSDGGIRLLIGDPSSCTVSVSIPAAFENLKKQISACTLYHDKGPEPWLRKASTDAWLSTGVDEAIDGSDGLLHDQGDIYCVVCYESGSLEIFDVPNFNCVFSVDKFVSGKTHLVDTLMQDPSKDSQKLINKSSEEVSGQGRKENIEDMKVVELAMQRWSGQHSRPFLFGILNDGMILCYHAYLFEGPETTSKTEDSASAQSTSGLTNVSASRLRNLRFARVPLDTYARKDMSTETSCQRMTIFKNIAGYQGLFLSGSRPAWLMVFRERLRVHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGILKICQLPPISSYDNYWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVHKPLNQILSSLVDQEAGHQVENHNLSSDELHRTYTVDEFEVRIMEPEKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTNENETLIAIGTAYVQGEDVAARGRVLLFSAGNNTQNLVSEVYAKEFKGAISALASLQGHLLIAQGPKITLNKWNGTELNGVAFFDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGSQLNLLAKDFGNLDCFATEFLIDGSTLSLVVADEQKNIQIFFYAPKMSESWKGQKLLSRAEFHVGTHVTKFLRLQMLSTSGTNPGSDKTNRYALLFGTLDGSIGCVAPLDELTFRRLQSLQKKLVDAVAHVAGLNPRAFRQFRSNGKAHRPGPDTIVDCELLTHYEMLPLEEQLEIANQIGTTRSQIFTNLNDLAIGTSFL